Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdhr3Q8BL00 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Gm15427-201ENSMUST00000117288 531 ntBASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Gm11543-201ENSMUST00000120758 370 ntBASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdhr3Q8BL00 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdhr3Q8BL00 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 212 ms