Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25349-201ENSMUST00000177728 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm23616-201ENSMUST00000177797 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25871-201ENSMUST00000177816 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm24752-201ENSMUST00000178240 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm24496-201ENSMUST00000178287 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25649-201ENSMUST00000178476 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25548-201ENSMUST00000178681 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm23147-201ENSMUST00000178841 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm26095-201ENSMUST00000179270 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm22171-201ENSMUST00000179283 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm23936-201ENSMUST00000179354 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm22619-201ENSMUST00000179516 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25255-201ENSMUST00000179579 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm24755-201ENSMUST00000179691 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm26506-201ENSMUST00000179692 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm25086-201ENSMUST00000179931 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm23243-201ENSMUST00000180047 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm24659-201ENSMUST00000180212 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm24169-201ENSMUST00000180244 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm23689-201ENSMUST00000180354 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm27359-201ENSMUST00000184153 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm27785-201ENSMUST00000184268 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm27466-201ENSMUST00000184396 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm27703-201ENSMUST00000184836 110 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm44335-201ENSMUST00000196879 141 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm44297-201ENSMUST00000198304 141 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm44346-201ENSMUST00000198851 141 ntBASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn3Q8BHH8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn3Q8BHH8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms