Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc5a7Q8BGY9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc5a7Q8BGY9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc5a7Q8BGY9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slc5a7Q8BGY9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Slc5a7Q8BGY9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slc5a7Q8BGY9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Gm13418-201ENSMUST00000119097 944 ntBASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Gm6089-201ENSMUST00000197666 938 ntBASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc5a7Q8BGY9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc5a7Q8BGY9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms