Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm13689-201ENSMUST00000119360 685 ntBASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm24420-201ENSMUST00000176676 59 ntBASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm45784-201ENSMUST00000188360 142 ntBASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Usp6nlQ80XC3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Usp6nlQ80XC3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm13392-201ENSMUST00000117708 150 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm14660-201ENSMUST00000119809 575 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Snora78-201ENSMUST00000158630 128 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms