Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx55Q6ZPL9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Gm38002-201ENSMUST00000193255 180 ntBASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx55Q6ZPL9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm12203-201ENSMUST00000118235 598 ntBASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm12209-201ENSMUST00000120089 596 ntBASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm27682-201ENSMUST00000183930 110 ntBASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx55Q6ZPL9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ddx55Q6ZPL9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm22018-201ENSMUST00000104357 131 ntBASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms