Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.04□□□□□ -0.32
AtmQ62388 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AtmQ62388 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Mir1943-201ENSMUST00000158276 73 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Gm37489-201ENSMUST00000191883 159 ntBASIC13.04□□□□□ -0.32
AtmQ62388 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.04□□□□□ -0.32
AtmQ62388 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AtmQ62388 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.04□□□□□ -0.32
AtmQ62388 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AtmQ62388 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.03□□□□□ -0.32
AtmQ62388 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.03□□□□□ -0.32
AtmQ62388 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.03□□□□□ -0.32
AtmQ62388 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
AtmQ62388 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
AtmQ62388 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.03□□□□□ -0.32
AtmQ62388 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.03□□□□□ -0.32
AtmQ62388 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Gm37922-201ENSMUST00000195596 455 ntBASIC13.03□□□□□ -0.32
AtmQ62388 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AtmQ62388 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.03□□□□□ -0.32
AtmQ62388 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
AtmQ62388 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.02□□□□□ -0.32
AtmQ62388 Gm27023-201ENSMUST00000182372 285 ntBASIC13.02□□□□□ -0.32
AtmQ62388 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.02□□□□□ -0.32
AtmQ62388 Gm5051-201ENSMUST00000204085 485 ntBASIC13.02□□□□□ -0.32
AtmQ62388 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.02□□□□□ -0.32
AtmQ62388 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
AtmQ62388 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AtmQ62388 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
AtmQ62388 Gm14277-201ENSMUST00000121195 360 ntBASIC13.02□□□□□ -0.33
AtmQ62388 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
AtmQ62388 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
AtmQ62388 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.02□□□□□ -0.33
AtmQ62388 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
AtmQ62388 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.02□□□□□ -0.33
AtmQ62388 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.02□□□□□ -0.33
AtmQ62388 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.02□□□□□ -0.33
AtmQ62388 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AtmQ62388 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Gm4986-201ENSMUST00000119731 549 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Morn2-202ENSMUST00000227729 656 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Gm11439-201ENSMUST00000118598 409 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AtmQ62388 Gm44551-201ENSMUST00000208804 171 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Gm18212-201ENSMUST00000211678 889 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.01□□□□□ -0.33
AtmQ62388 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AtmQ62388 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AtmQ62388 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms