Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn9aQ62205 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.26■□□□□ 0.19
Scn9aQ62205 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn9aQ62205 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn9aQ62205 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.25■□□□□ 0.19
Scn9aQ62205 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn9aQ62205 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn9aQ62205 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Gm21769-201ENSMUST00000211922 111 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 Gm26315-201ENSMUST00000083890 321 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn9aQ62205 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Gm20482-202ENSMUST00000174729 825 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn9aQ62205 Gm10608-202ENSMUST00000213924 676 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.24■□□□□ 0.19
Scn9aQ62205 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.23■□□□□ 0.19
Scn9aQ62205 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.23■□□□□ 0.19
Scn9aQ62205 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Scn9aQ62205 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.23■□□□□ 0.19
Scn9aQ62205 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Scn9aQ62205 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn9aQ62205 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.23■□□□□ 0.19
Scn9aQ62205 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn9aQ62205 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.22■□□□□ 0.19
Scn9aQ62205 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm14350-201ENSMUST00000116642 640 ntBASIC16.22■□□□□ 0.19
Scn9aQ62205 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms