Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.94□□□□□ -0.34
VcanQ62059 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.94□□□□□ -0.34
VcanQ62059 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VcanQ62059 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.94□□□□□ -0.34
VcanQ62059 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.94□□□□□ -0.34
VcanQ62059 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.94□□□□□ -0.34
VcanQ62059 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.94□□□□□ -0.34
VcanQ62059 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.94□□□□□ -0.34
VcanQ62059 Gm11591-201ENSMUST00000120063 702 ntBASIC12.94□□□□□ -0.34
VcanQ62059 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.94□□□□□ -0.34
VcanQ62059 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VcanQ62059 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
VcanQ62059 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VcanQ62059 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VcanQ62059 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.94□□□□□ -0.34
VcanQ62059 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VcanQ62059 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Itm2b-204ENSMUST00000228637 783 ntBASIC12.93□□□□□ -0.34
VcanQ62059 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VcanQ62059 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.93□□□□□ -0.34
VcanQ62059 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.93□□□□□ -0.34
VcanQ62059 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.93□□□□□ -0.34
VcanQ62059 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.93□□□□□ -0.34
VcanQ62059 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VcanQ62059 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.92□□□□□ -0.34
VcanQ62059 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.92□□□□□ -0.34
VcanQ62059 Gm20392-201ENSMUST00000173047 701 ntBASIC12.92□□□□□ -0.34
VcanQ62059 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.92□□□□□ -0.34
VcanQ62059 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.92□□□□□ -0.34
VcanQ62059 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VcanQ62059 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VcanQ62059 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
VcanQ62059 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms