Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sox17Q61473 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox17Q61473 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox17Q61473 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Sox17Q61473 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox17Q61473 Gm16026-204ENSMUST00000162652 683 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Gm34391-201ENSMUST00000203706 907 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox17Q61473 Gm6376-201ENSMUST00000209407 580 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.21□□□□□ -0.29
Sox17Q61473 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox17Q61473 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.21□□□□□ -0.3
Sox17Q61473 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox17Q61473 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Sox17Q61473 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox17Q61473 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox17Q61473 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox17Q61473 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox17Q61473 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Sox17Q61473 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm27300-201ENSMUST00000184085 97 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Gm27335-201ENSMUST00000184758 97 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm45098-201ENSMUST00000207179 657 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.2□□□□□ -0.3
Sox17Q61473 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox17Q61473 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox17Q61473 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sox17Q61473 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.19□□□□□ -0.3
Sox17Q61473 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.19□□□□□ -0.3
Sox17Q61473 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Gm7153-201ENSMUST00000117092 455 ntBASIC13.19□□□□□ -0.3
Sox17Q61473 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox17Q61473 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Sox17Q61473 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox17Q61473 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox17Q61473 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sox17Q61473 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.19□□□□□ -0.3
Sox17Q61473 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox17Q61473 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sox17Q61473 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms