Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.58■□□□□ 0.08
Ift88Q61371 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ift88Q61371 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ift88Q61371 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ift88Q61371 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ift88Q61371 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ift88Q61371 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ift88Q61371 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.56■□□□□ 0.08
Ift88Q61371 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.56■□□□□ 0.08
Ift88Q61371 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.56■□□□□ 0.08
Ift88Q61371 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.56■□□□□ 0.08
Ift88Q61371 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.56■□□□□ 0.08
Ift88Q61371 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.56■□□□□ 0.08
Ift88Q61371 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.56■□□□□ 0.08
Ift88Q61371 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.56■□□□□ 0.08
Ift88Q61371 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.56■□□□□ 0.08
Ift88Q61371 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ift88Q61371 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ift88Q61371 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ift88Q61371 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Ift88Q61371 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Ift88Q61371 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ift88Q61371 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.55■□□□□ 0.08
Ift88Q61371 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.55■□□□□ 0.08
Ift88Q61371 Gm1401-201ENSMUST00000122048 772 ntBASIC15.55■□□□□ 0.08
Ift88Q61371 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ift88Q61371 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Mir8117-201ENSMUST00000184773 107 ntBASIC15.55■□□□□ 0.08
Ift88Q61371 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.55■□□□□ 0.08
Ift88Q61371 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Ift88Q61371 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ift88Q61371 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ift88Q61371 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.54■□□□□ 0.08
Ift88Q61371 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms