Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm12585-201ENSMUST00000117307 290 ntBASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm15393-201ENSMUST00000120499 219 ntBASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm24694-201ENSMUST00000180054 110 ntBASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm27663-201ENSMUST00000184839 110 ntBASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfaip3Q60769 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm5866-201ENSMUST00000177881 973 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm7730-201ENSMUST00000212486 454 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfaip3Q60769 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfaip3Q60769 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms