Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Gm9797-201ENSMUST00000052902 613 ntBASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Gm7488-201ENSMUST00000117148 684 ntBASIC16.87■□□□□ 0.29
Vps54Q5SPW0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps54Q5SPW0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.86■□□□□ 0.29
Vps54Q5SPW0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps54Q5SPW0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms