Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Gm15794-201ENSMUST00000120182 631 ntBASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-3Q5R1C3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gm12497-201ENSMUST00000138778 237 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gm23634-201ENSMUST00000175071 91 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gm6345-202ENSMUST00000180900 204 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms