Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm43575-201ENSMUST00000196420 516 ntBASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm5779-201ENSMUST00000218467 910 ntBASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Gm23935-201ENSMUST00000102303 57 ntBASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Gm24270-201ENSMUST00000102326 57 ntBASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Gm24245-201ENSMUST00000157318 57 ntBASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf20Q5DTM8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf20Q5DTM8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Gm6415-201ENSMUST00000118488 348 ntBASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Gm15693-201ENSMUST00000120470 637 ntBASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Dupd1-202ENSMUST00000224735 548 ntBASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Rnf20Q5DTM8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rnf20Q5DTM8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms