Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.31□□□□□ -0.12
Spire1Q52KF3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spire1Q52KF3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Spire1Q52KF3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm12390-201ENSMUST00000117897 397 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm11814-201ENSMUST00000119515 929 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Mir1982-201ENSMUST00000157368 74 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.3□□□□□ -0.12
Spire1Q52KF3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spire1Q52KF3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.29□□□□□ -0.12
Spire1Q52KF3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Mir698-201ENSMUST00000102164 109 ntBASIC14.29□□□□□ -0.12
Spire1Q52KF3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.29□□□□□ -0.12
Spire1Q52KF3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.29□□□□□ -0.12
Spire1Q52KF3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spire1Q52KF3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spire1Q52KF3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spire1Q52KF3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spire1Q52KF3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.28□□□□□ -0.12
Spire1Q52KF3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.28□□□□□ -0.12
Spire1Q52KF3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spire1Q52KF3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms