Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.37■□□□□ 0.21
Ddx49Q4FZF3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm15198-201ENSMUST00000117283 177 ntBASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm27731-201ENSMUST00000185192 107 ntBASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm7561-201ENSMUST00000211203 886 ntBASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Olfr582-201ENSMUST00000098212 960 ntBASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx49Q4FZF3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm15240-201ENSMUST00000118156 720 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm11814-201ENSMUST00000119515 929 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm15429-201ENSMUST00000151268 798 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm7287-201ENSMUST00000205267 602 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.35■□□□□ 0.21
Ddx49Q4FZF3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Gm6091-201ENSMUST00000098307 165 ntBASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx49Q4FZF3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms