Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pls1Q3V0K9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pls1Q3V0K9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pls1Q3V0K9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pls1Q3V0K9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pls1Q3V0K9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.18■□□□□ 0.18
Pls1Q3V0K9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.18■□□□□ 0.18
Pls1Q3V0K9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pls1Q3V0K9 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm12341-201ENSMUST00000119724 503 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm37714-201ENSMUST00000194742 342 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm5279-201ENSMUST00000199575 745 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm44608-201ENSMUST00000206827 855 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Gm5425-201ENSMUST00000214125 459 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pls1Q3V0K9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pls1Q3V0K9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms