Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Gm13392-201ENSMUST00000117708 150 ntBASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp48Q3V0C5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Mir1247-201ENSMUST00000116706 82 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Gm12341-201ENSMUST00000119724 503 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Gm42693-201ENSMUST00000196779 631 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp48Q3V0C5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm5354-201ENSMUST00000182417 973 ntBASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm5356-201ENSMUST00000093326 615 ntBASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp48Q3V0C5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp48Q3V0C5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp48Q3V0C5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms