Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm17376-201ENSMUST00000166016 84 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm42550-201ENSMUST00000201553 960 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm10608-202ENSMUST00000213924 676 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm6082-201ENSMUST00000215204 454 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Gm10268-201ENSMUST00000085340 555 ntBASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fam196aQ3USH1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gm24255-201ENSMUST00000104481 128 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 App-207ENSMUST00000227737 2827 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fam196aQ3USH1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Gm25668-201ENSMUST00000157700 129 ntBASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Gm2991-201ENSMUST00000173338 480 ntBASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms