Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Gm5850-201ENSMUST00000192923 1206 ntBASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Arhgef40Q3UPH7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gm18630-201ENSMUST00000222109 1397 ntBASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gm15808-201ENSMUST00000119046 604 ntBASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gm37922-201ENSMUST00000195596 455 ntBASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Arhgef40Q3UPH7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Gm11618-201ENSMUST00000117946 267 ntBASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC20.34■□□□□ 0.85
Arhgef40Q3UPH7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Gm12176-201ENSMUST00000121420 875 ntBASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Mettl6-204ENSMUST00000227595 1027 ntBASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC20.33■□□□□ 0.85
Arhgef40Q3UPH7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Arhgef40Q3UPH7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gm11658-201ENSMUST00000120913 1008 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gm2467-201ENSMUST00000182266 1010 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gm6981-201ENSMUST00000182467 1008 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gm27501-201ENSMUST00000183599 107 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Cts7-204ENSMUST00000225321 1257 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Snora73a-201ENSMUST00000082453 205 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Gm7993-201ENSMUST00000200970 1384 ntBASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Arhgef40Q3UPH7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms