Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Nlrc4Q3UP24 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nlrc4Q3UP24 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Nlrc4Q3UP24 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Nlrc4Q3UP24 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nlrc4Q3UP24 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Gm29667-201ENSMUST00000190817 490 ntBASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nlrc4Q3UP24 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm15393-201ENSMUST00000120499 219 ntBASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm14057-201ENSMUST00000120631 482 ntBASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm27838-201ENSMUST00000184829 128 ntBASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm21470-201ENSMUST00000187680 696 ntBASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nlrc4Q3UP24 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Gm12585-201ENSMUST00000117307 290 ntBASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.81□□□□□ -0.04
Nlrc4Q3UP24 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms