Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.57■□□□□ 0.24
Limch1Q3UH68 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Limch1Q3UH68 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.56■□□□□ 0.24
Limch1Q3UH68 Gm14767-201ENSMUST00000121559 586 ntBASIC16.56■□□□□ 0.24
Limch1Q3UH68 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Limch1Q3UH68 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm29310-201ENSMUST00000185468 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21825-201ENSMUST00000185728 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm29109-201ENSMUST00000185895 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21896-201ENSMUST00000186520 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21873-201ENSMUST00000186728 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21794-201ENSMUST00000187056 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21880-201ENSMUST00000187275 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21826-201ENSMUST00000187451 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21198-201ENSMUST00000188393 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21749-201ENSMUST00000189343 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21901-201ENSMUST00000189568 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm29424-201ENSMUST00000189716 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm28599-201ENSMUST00000189838 694 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21867-201ENSMUST00000189917 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm29269-201ENSMUST00000190087 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21722-201ENSMUST00000190153 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm28423-201ENSMUST00000190701 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21899-201ENSMUST00000190745 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21910-201ENSMUST00000191163 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21849-201ENSMUST00000191571 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm28678-201ENSMUST00000191593 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm20910-201ENSMUST00000193268 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm21871-201ENSMUST00000194621 696 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm9063-201ENSMUST00000223299 582 ntBASIC16.55■□□□□ 0.24
Limch1Q3UH68 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Limch1Q3UH68 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms