Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccbe1Q3MI99 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Mzt1-203ENSMUST00000227948 952 ntBASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccbe1Q3MI99 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccbe1Q3MI99 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccbe1Q3MI99 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccbe1Q3MI99 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms