Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Gm5177-201ENSMUST00000183092 997 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Gm10154-201ENSMUST00000084445 354 ntBASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ptchd3Q0EEE2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm16198-201ENSMUST00000118766 670 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm2451-201ENSMUST00000199447 999 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm10290-201ENSMUST00000200451 999 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
Ptchd3Q0EEE2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm17968-201ENSMUST00000194902 784 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 AW822252-206ENSMUST00000208904 237 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Thap2-203ENSMUST00000218989 527 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ptchd3Q0EEE2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms