Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Gm18733-201ENSMUST00000173950 856 ntBASIC13.04□□□□□ -0.32
MitfQ08874 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.04□□□□□ -0.32
MitfQ08874 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MitfQ08874 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MitfQ08874 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MitfQ08874 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.03□□□□□ -0.32
MitfQ08874 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
MitfQ08874 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MitfQ08874 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.03□□□□□ -0.32
MitfQ08874 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
MitfQ08874 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
MitfQ08874 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MitfQ08874 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MitfQ08874 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MitfQ08874 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MitfQ08874 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.02□□□□□ -0.32
MitfQ08874 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MitfQ08874 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
MitfQ08874 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.02□□□□□ -0.33
MitfQ08874 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Gm7222-201ENSMUST00000117512 906 ntBASIC13.02□□□□□ -0.33
MitfQ08874 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.02□□□□□ -0.33
MitfQ08874 Gm37230-201ENSMUST00000194491 818 ntBASIC13.02□□□□□ -0.33
MitfQ08874 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.02□□□□□ -0.33
MitfQ08874 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MitfQ08874 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
MitfQ08874 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
MitfQ08874 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.01□□□□□ -0.33
MitfQ08874 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MitfQ08874 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MitfQ08874 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
MitfQ08874 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MitfQ08874 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MitfQ08874 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms