Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Hspg2Q05793 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.12□□□□□ -0.79
Hspg2Q05793 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.12□□□□□ -0.79
Hspg2Q05793 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.12□□□□□ -0.79
Hspg2Q05793 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.12□□□□□ -0.79
Hspg2Q05793 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hspg2Q05793 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.12□□□□□ -0.79
Hspg2Q05793 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.11□□□□□ -0.79
Hspg2Q05793 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Mir1943-201ENSMUST00000158276 73 ntBASIC10.11□□□□□ -0.79
Hspg2Q05793 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.11□□□□□ -0.79
Hspg2Q05793 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.11□□□□□ -0.79
Hspg2Q05793 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.11□□□□□ -0.79
Hspg2Q05793 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm13123-201ENSMUST00000122173 492 ntBASIC10.11□□□□□ -0.79
Hspg2Q05793 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.11□□□□□ -0.79
Hspg2Q05793 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Hspg2Q05793 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.11□□□□□ -0.79
Hspg2Q05793 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.11□□□□□ -0.79
Hspg2Q05793 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Hspg2Q05793 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm20426-201ENSMUST00000173657 440 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm11591-201ENSMUST00000120063 702 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.1□□□□□ -0.79
Hspg2Q05793 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm7046-201ENSMUST00000221351 977 ntBASIC10.1□□□□□ -0.79
Hspg2Q05793 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.1□□□□□ -0.79
Hspg2Q05793 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hspg2Q05793 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms