Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm25880-201ENSMUST00000104331 132 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm11667-201ENSMUST00000119828 486 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm19459-201ENSMUST00000176240 835 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm28450-201ENSMUST00000187349 638 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm8190-201ENSMUST00000199603 586 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 BC001981-202ENSMUST00000191393 1545 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col9a1Q05722 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.78□□□□□ -0.2
Col9a1Q05722 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col9a1Q05722 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col9a1Q05722 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col9a1Q05722 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Col9a1Q05722 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col9a1Q05722 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Col9a1Q05722 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.77□□□□□ -0.21
Col9a1Q05722 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm18905-201ENSMUST00000205454 928 ntBASIC13.77□□□□□ -0.21
Col9a1Q05722 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.77□□□□□ -0.21
Col9a1Q05722 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.77□□□□□ -0.21
Col9a1Q05722 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col9a1Q05722 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Gm38262-201ENSMUST00000194760 1382 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Gm11222-201ENSMUST00000119005 738 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Gm15376-201ENSMUST00000122258 783 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Mospd4-201ENSMUST00000180618 576 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms