Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13□□□□□ -0.33
Col10a1Q05306 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13□□□□□ -0.33
Col10a1Q05306 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13□□□□□ -0.33
Col10a1Q05306 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Col10a1Q05306 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Gm44344-201ENSMUST00000200287 129 ntBASIC13□□□□□ -0.33
Col10a1Q05306 Gm6916-202ENSMUST00000205523 195 ntBASIC13□□□□□ -0.33
Col10a1Q05306 Gm46209-201ENSMUST00000217912 553 ntBASIC13□□□□□ -0.33
Col10a1Q05306 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13□□□□□ -0.33
Col10a1Q05306 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col10a1Q05306 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col10a1Q05306 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col10a1Q05306 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm15653-201ENSMUST00000119247 907 ntBASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm14767-201ENSMUST00000121559 586 ntBASIC12.99□□□□□ -0.33
Col10a1Q05306 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col10a1Q05306 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col10a1Q05306 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.98□□□□□ -0.33
Col10a1Q05306 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.98□□□□□ -0.33
Col10a1Q05306 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.98□□□□□ -0.33
Col10a1Q05306 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.98□□□□□ -0.33
Col10a1Q05306 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.98□□□□□ -0.33
Col10a1Q05306 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms