Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.16□□□□□ -0.14
Pfdn6Q03958 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn6Q03958 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm13365-201ENSMUST00000121188 973 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm8584-201ENSMUST00000171982 758 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Mir6990-201ENSMUST00000183724 91 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 AA619741-201ENSMUST00000195095 646 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.15□□□□□ -0.14
Pfdn6Q03958 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn6Q03958 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pfdn6Q03958 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm29310-201ENSMUST00000185468 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21825-201ENSMUST00000185728 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm29109-201ENSMUST00000185895 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21896-201ENSMUST00000186520 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21873-201ENSMUST00000186728 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21794-201ENSMUST00000187056 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21880-201ENSMUST00000187275 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21826-201ENSMUST00000187451 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21198-201ENSMUST00000188393 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21749-201ENSMUST00000189343 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21901-201ENSMUST00000189568 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm29424-201ENSMUST00000189716 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm28599-201ENSMUST00000189838 694 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21867-201ENSMUST00000189917 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm29269-201ENSMUST00000190087 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21722-201ENSMUST00000190153 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm28423-201ENSMUST00000190701 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21899-201ENSMUST00000190745 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21910-201ENSMUST00000191163 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21849-201ENSMUST00000191571 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm28678-201ENSMUST00000191593 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm20910-201ENSMUST00000193268 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm21871-201ENSMUST00000194621 696 ntBASIC14.14□□□□□ -0.15
Pfdn6Q03958 Gm43125-201ENSMUST00000201724 730 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms