Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a1Q00780 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a1Q00780 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a1Q00780 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a1Q00780 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Col8a1Q00780 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a1Q00780 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Col8a1Q00780 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Gm11814-201ENSMUST00000119515 929 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.99□□□□□ -0.49
Col8a1Q00780 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.99□□□□□ -0.49
Col8a1Q00780 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a1Q00780 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.99□□□□□ -0.49
Col8a1Q00780 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a1Q00780 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 BC001981-202ENSMUST00000191393 1545 ntBASIC11.98□□□□□ -0.49
Col8a1Q00780 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Gm29649-201ENSMUST00000185649 419 ntBASIC11.98□□□□□ -0.49
Col8a1Q00780 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.98□□□□□ -0.49
Col8a1Q00780 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col8a1Q00780 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a1Q00780 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.97□□□□□ -0.49
Col8a1Q00780 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.97□□□□□ -0.49
Col8a1Q00780 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a1Q00780 Gm5370-201ENSMUST00000187187 574 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms