Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Cacna1aP97445 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1aP97445 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gm15957-201ENSMUST00000118893 974 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 Gm5370-201ENSMUST00000187187 574 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.97□□□□□ -0.33
Cacna1aP97445 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1aP97445 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1aP97445 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm27516-201ENSMUST00000184237 98 ntBASIC12.96□□□□□ -0.33
Cacna1aP97445 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.96□□□□□ -0.33
Cacna1aP97445 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.96□□□□□ -0.33
Cacna1aP97445 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm8652-201ENSMUST00000181363 964 ntBASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.96□□□□□ -0.33
Cacna1aP97445 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.96□□□□□ -0.33
Cacna1aP97445 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1aP97445 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cacna1aP97445 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Cacna1aP97445 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1aP97445 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1aP97445 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Cacna1aP97445 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cacna1aP97445 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1aP97445 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Cacna1aP97445 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms