Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim43cP86449 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim43cP86449 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Gm13453-201ENSMUST00000118708 357 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Gm46209-201ENSMUST00000217912 553 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.3■□□□□ 0.04
Trim43cP86449 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trim43cP86449 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim43cP86449 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim43cP86449 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43cP86449 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Gm15460-201ENSMUST00000118147 391 ntBASIC15.29■□□□□ 0.04
Trim43cP86449 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Gm44344-201ENSMUST00000200287 129 ntBASIC15.29■□□□□ 0.04
Trim43cP86449 Gm9229-201ENSMUST00000222777 126 ntBASIC15.29■□□□□ 0.04
Trim43cP86449 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43cP86449 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim43cP86449 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trim43cP86449 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim43cP86449 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.28■□□□□ 0.04
Trim43cP86449 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.28■□□□□ 0.04
Trim43cP86449 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim43cP86449 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim43cP86449 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Gm33320-201ENSMUST00000192232 530 ntBASIC15.28■□□□□ 0.04
Trim43cP86449 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.28■□□□□ 0.04
Trim43cP86449 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim43cP86449 Gm18027-201ENSMUST00000218947 619 ntBASIC15.28■□□□□ 0.04
Trim43cP86449 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim43cP86449 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43cP86449 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms