Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
H3f3aP84244 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H3f3aP84244 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.54□□□□□ -0.4
H3f3aP84244 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.54□□□□□ -0.4
H3f3aP84244 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.54□□□□□ -0.4
H3f3aP84244 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.54□□□□□ -0.4
H3f3aP84244 Gm7775-201ENSMUST00000218871 853 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H3f3aP84244 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.54□□□□□ -0.4
H3f3aP84244 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.54□□□□□ -0.4
H3f3aP84244 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3aP84244 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3f3aP84244 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.53□□□□□ -0.4
H3f3aP84244 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3f3aP84244 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.53□□□□□ -0.4
H3f3aP84244 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
H3f3aP84244 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.53□□□□□ -0.4
H3f3aP84244 Gm33320-201ENSMUST00000192232 530 ntBASIC12.53□□□□□ -0.4
H3f3aP84244 Gm43703-201ENSMUST00000200523 763 ntBASIC12.53□□□□□ -0.4
H3f3aP84244 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3f3aP84244 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3aP84244 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
H3f3aP84244 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3aP84244 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
H3f3aP84244 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3aP84244 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
H3f3aP84244 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3aP84244 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3aP84244 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms