Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Gm11780-201ENSMUST00000136880 516 ntBASIC11.81□□□□□ -0.52
SgcaP82350 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.81□□□□□ -0.52
SgcaP82350 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.81□□□□□ -0.52
SgcaP82350 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.81□□□□□ -0.52
SgcaP82350 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.81□□□□□ -0.52
SgcaP82350 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.81□□□□□ -0.52
SgcaP82350 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.81□□□□□ -0.52
SgcaP82350 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SgcaP82350 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
SgcaP82350 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SgcaP82350 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SgcaP82350 Gm13464-201ENSMUST00000119418 935 ntBASIC11.8□□□□□ -0.52
SgcaP82350 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.8□□□□□ -0.52
SgcaP82350 Gm12895-201ENSMUST00000122214 226 ntBASIC11.8□□□□□ -0.52
SgcaP82350 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Gm37153-201ENSMUST00000193637 231 ntBASIC11.8□□□□□ -0.52
SgcaP82350 Gm18041-201ENSMUST00000218210 618 ntBASIC11.8□□□□□ -0.52
SgcaP82350 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.8□□□□□ -0.52
SgcaP82350 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcaP82350 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcaP82350 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.79□□□□□ -0.52
SgcaP82350 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.79□□□□□ -0.52
SgcaP82350 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.79□□□□□ -0.52
SgcaP82350 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.79□□□□□ -0.52
SgcaP82350 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcaP82350 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms