Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rpl39P62892 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rpl39P62892 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rpl39P62892 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rpl39P62892 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Rpl39P62892 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Rpl39P62892 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Gm9182-201ENSMUST00000217829 639 ntBASIC10.04□□□□□ -0.8
Rpl39P62892 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Rpl39P62892 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rpl39P62892 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.04□□□□□ -0.8
Rpl39P62892 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rpl39P62892 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Rpl39P62892 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.04□□□□□ -0.8
Rpl39P62892 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Rpl39P62892 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Rpl39P62892 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rpl39P62892 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Rpl39P62892 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rpl39P62892 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Gm14859-201ENSMUST00000117752 357 ntBASIC10.03□□□□□ -0.8
Rpl39P62892 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Gm4899-201ENSMUST00000178708 719 ntBASIC10.03□□□□□ -0.8
Rpl39P62892 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Gm17807-201ENSMUST00000186869 298 ntBASIC10.03□□□□□ -0.8
Rpl39P62892 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.03□□□□□ -0.8
Rpl39P62892 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms