Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Rps28P62858 Ap1g1-206ENSMUST00000179104 1096 ntBASIC8.2□□□□□ -1.1
Rps28P62858 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.2□□□□□ -1.1
Rps28P62858 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rps28P62858 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.2□□□□□ -1.1
Rps28P62858 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rps28P62858 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.19□□□□□ -1.1
Rps28P62858 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gm18164-201ENSMUST00000213769 927 ntBASIC8.19□□□□□ -1.1
Rps28P62858 Gm18166-201ENSMUST00000215557 927 ntBASIC8.19□□□□□ -1.1
Rps28P62858 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rps28P62858 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gm8036-201ENSMUST00000118089 1718 ntBASIC8.19□□□□□ -1.1
Rps28P62858 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Rps28P62858 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rps28P62858 AC122314.1-201ENSMUST00000223056 2239 ntBASIC8.19□□□□□ -1.1
Rps28P62858 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rps28P62858 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms