Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gm20553-201ENSMUST00000204205 844 ntBASIC12.42□□□□□ -0.42
Sec61a1P61620 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sec61a1P61620 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sec61a1P61620 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm11745-201ENSMUST00000121669 448 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm27494-201ENSMUST00000184735 189 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sec61a1P61620 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm10154-201ENSMUST00000084445 354 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.41□□□□□ -0.42
Sec61a1P61620 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms