Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.1□□□□□ -0.79
Ube2d3P61079 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ube2d3P61079 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube2d3P61079 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.1□□□□□ -0.79
Ube2d3P61079 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.1□□□□□ -0.79
Ube2d3P61079 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube2d3P61079 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube2d3P61079 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube2d3P61079 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube2d3P61079 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ube2d3P61079 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.09□□□□□ -0.79
Ube2d3P61079 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.09□□□□□ -0.79
Ube2d3P61079 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.09□□□□□ -0.79
Ube2d3P61079 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Acot6-202ENSMUST00000222921 3622 ntBASIC10.09□□□□□ -0.79
Ube2d3P61079 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube2d3P61079 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ube2d3P61079 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Ube2d3P61079 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ube2d3P61079 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.08□□□□□ -0.8
Ube2d3P61079 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube2d3P61079 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms