Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.72■□□□□ 0.11
Tpm1P58771 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tpm1P58771 Gm28033-201ENSMUST00000184224 96 ntBASIC15.72■□□□□ 0.11
Tpm1P58771 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.72■□□□□ 0.11
Tpm1P58771 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
Tpm1P58771 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tpm1P58771 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Grk6-205ENSMUST00000224653 2976 ntBASIC15.71■□□□□ 0.11
Tpm1P58771 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.71■□□□□ 0.11
Tpm1P58771 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tpm1P58771 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.71■□□□□ 0.11
Tpm1P58771 Ank2-226ENSMUST00000189368 339 ntBASIC15.71■□□□□ 0.11
Tpm1P58771 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.71■□□□□ 0.11
Tpm1P58771 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.71■□□□□ 0.11
Tpm1P58771 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tpm1P58771 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tpm1P58771 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tpm1P58771 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tpm1P58771 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tpm1P58771 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tpm1P58771 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tpm1P58771 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.7■□□□□ 0.1
Tpm1P58771 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
Tpm1P58771 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tpm1P58771 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.7■□□□□ 0.1
Tpm1P58771 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Tpm1P58771 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.7■□□□□ 0.1
Tpm1P58771 Gm34391-201ENSMUST00000203706 907 ntBASIC15.7■□□□□ 0.1
Tpm1P58771 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.7■□□□□ 0.1
Tpm1P58771 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tpm1P58771 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Tpm1P58771 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm1P58771 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Gm7153-201ENSMUST00000117092 455 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.69■□□□□ 0.1
Tpm1P58771 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Gm16026-204ENSMUST00000162652 683 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Gm45098-201ENSMUST00000207179 657 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.69■□□□□ 0.1
Tpm1P58771 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.69■□□□□ 0.1
Tpm1P58771 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Gm10154-201ENSMUST00000084445 354 ntBASIC15.69■□□□□ 0.1
Tpm1P58771 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms