Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lim2P56563 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Gm27321-201ENSMUST00000185021 205 ntBASIC14.09□□□□□ -0.15
Lim2P56563 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lim2P56563 Gm7775-201ENSMUST00000218871 853 ntBASIC14.09□□□□□ -0.15
Lim2P56563 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.09□□□□□ -0.15
Lim2P56563 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.09□□□□□ -0.15
Lim2P56563 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Lim2P56563 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.09□□□□□ -0.15
Lim2P56563 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Lim2P56563 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lim2P56563 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lim2P56563 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lim2P56563 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.08□□□□□ -0.16
Lim2P56563 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Lim2P56563 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Lim2P56563 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Lim2P56563 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Gm15957-201ENSMUST00000118893 974 ntBASIC14.08□□□□□ -0.16
Lim2P56563 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.08□□□□□ -0.16
Lim2P56563 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Lim2P56563 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Lim2P56563 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lim2P56563 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.07□□□□□ -0.16
Lim2P56563 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.07□□□□□ -0.16
Lim2P56563 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lim2P56563 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Lim2P56563 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Lim2P56563 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.07□□□□□ -0.16
Lim2P56563 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lim2P56563 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms