Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Mir1897-201ENSMUST00000122581 272 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Irf5P56477 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Irf5P56477 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Gm42612-201ENSMUST00000197986 623 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Gm43170-201ENSMUST00000199827 612 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.72■□□□□ 0.27
Irf5P56477 Gm18062-201ENSMUST00000208020 547 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Gm18055-201ENSMUST00000208254 547 ntBASIC16.72■□□□□ 0.27
Irf5P56477 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Irf5P56477 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.72■□□□□ 0.27
Irf5P56477 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Irf5P56477 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Irf5P56477 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Irf5P56477 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Irf5P56477 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.71■□□□□ 0.27
Irf5P56477 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.71■□□□□ 0.27
Irf5P56477 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.71■□□□□ 0.27
Irf5P56477 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.71■□□□□ 0.27
Irf5P56477 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.71■□□□□ 0.27
Irf5P56477 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Irf5P56477 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.71■□□□□ 0.27
Irf5P56477 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.71■□□□□ 0.27
Irf5P56477 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Irf5P56477 Gm46209-201ENSMUST00000217912 553 ntBASIC16.71■□□□□ 0.27
Irf5P56477 Gm9229-201ENSMUST00000222777 126 ntBASIC16.71■□□□□ 0.27
Irf5P56477 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Irf5P56477 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Irf5P56477 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Irf5P56477 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Irf5P56477 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Irf5P56477 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Irf5P56477 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.7■□□□□ 0.26
Irf5P56477 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Irf5P56477 Gm12091-201ENSMUST00000146791 830 ntBASIC16.7■□□□□ 0.26
Irf5P56477 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.7■□□□□ 0.26
Irf5P56477 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.7■□□□□ 0.26
Irf5P56477 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.7■□□□□ 0.26
Irf5P56477 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
Irf5P56477 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Irf5P56477 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Irf5P56477 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Irf5P56477 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Irf5P56477 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Acot6-202ENSMUST00000222921 3622 ntBASIC16.69■□□□□ 0.26
Irf5P56477 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.69■□□□□ 0.26
Irf5P56477 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Irf5P56477 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.69■□□□□ 0.26
Irf5P56477 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms