Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.16■□□□□ 0.02
Nub1P54729 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nub1P54729 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Nub1P54729 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nub1P54729 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Nub1P54729 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nub1P54729 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Nub1P54729 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nub1P54729 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.15■□□□□ 0.02
Nub1P54729 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.15■□□□□ 0.02
Nub1P54729 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.15■□□□□ 0.02
Nub1P54729 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.15■□□□□ 0.02
Nub1P54729 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nub1P54729 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.14■□□□□ 0.01
Nub1P54729 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nub1P54729 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nub1P54729 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nub1P54729 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nub1P54729 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.14■□□□□ 0.01
Nub1P54729 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.14■□□□□ 0.01
Nub1P54729 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nub1P54729 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.14■□□□□ 0.01
Nub1P54729 Gm17837-201ENSMUST00000186435 985 ntBASIC15.14■□□□□ 0.01
Nub1P54729 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nub1P54729 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Nub1P54729 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.14■□□□□ 0.01
Nub1P54729 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nub1P54729 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
Nub1P54729 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.13■□□□□ 0.01
Nub1P54729 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.13■□□□□ 0.01
Nub1P54729 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nub1P54729 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms