Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sybu-209ENSMUST00000228639 4113 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox1P53783 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sox1P53783 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox1P53783 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox1P53783 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Gm27438-201ENSMUST00000183480 110 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox1P53783 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Gm37489-201ENSMUST00000191883 159 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox1P53783 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.29□□□□□ -0.12
Sox1P53783 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.29□□□□□ -0.12
Sox1P53783 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox1P53783 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox1P53783 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox1P53783 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox1P53783 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.28□□□□□ -0.12
Sox1P53783 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sox1P53783 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Gm21769-201ENSMUST00000211922 111 ntBASIC14.28□□□□□ -0.12
Sox1P53783 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Sox1P53783 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.28□□□□□ -0.12
Sox1P53783 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sox1P53783 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox1P53783 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.27□□□□□ -0.12
Sox1P53783 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.27□□□□□ -0.12
Sox1P53783 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox1P53783 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox1P53783 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sox1P53783 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Gm11439-201ENSMUST00000118598 409 ntBASIC14.27□□□□□ -0.13
Sox1P53783 Gm13369-201ENSMUST00000119442 987 ntBASIC14.27□□□□□ -0.13
Sox1P53783 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox1P53783 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sox1P53783 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.27□□□□□ -0.13
Sox1P53783 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sox1P53783 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.27□□□□□ -0.13
Sox1P53783 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.27□□□□□ -0.13
Sox1P53783 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms