Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.93□□□□□ -0.18
Pdx1P52946 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.93□□□□□ -0.18
Pdx1P52946 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdx1P52946 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.93□□□□□ -0.18
Pdx1P52946 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdx1P52946 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pdx1P52946 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Gm15920-201ENSMUST00000118998 402 ntBASIC13.92□□□□□ -0.18
Pdx1P52946 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.92□□□□□ -0.18
Pdx1P52946 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pdx1P52946 Gm7775-201ENSMUST00000218871 853 ntBASIC13.92□□□□□ -0.18
Pdx1P52946 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.92□□□□□ -0.18
Pdx1P52946 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pdx1P52946 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdx1P52946 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Pdx1P52946 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.92□□□□□ -0.18
Pdx1P52946 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pdx1P52946 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdx1P52946 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdx1P52946 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.92□□□□□ -0.18
Pdx1P52946 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Gm27321-201ENSMUST00000185021 205 ntBASIC13.91□□□□□ -0.18
Pdx1P52946 Gm33320-201ENSMUST00000192232 530 ntBASIC13.91□□□□□ -0.18
Pdx1P52946 Gm9229-201ENSMUST00000222777 126 ntBASIC13.91□□□□□ -0.18
Pdx1P52946 Gm9063-201ENSMUST00000223299 582 ntBASIC13.91□□□□□ -0.18
Pdx1P52946 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pdx1P52946 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.91□□□□□ -0.18
Pdx1P52946 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdx1P52946 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdx1P52946 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.9□□□□□ -0.18
Pdx1P52946 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.9□□□□□ -0.18
Pdx1P52946 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.9□□□□□ -0.18
Pdx1P52946 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.9□□□□□ -0.18
Pdx1P52946 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.9□□□□□ -0.18
Pdx1P52946 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms