Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Nkx2-1P50220 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm6550-201ENSMUST00000187574 993 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm18195-201ENSMUST00000207604 706 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 Grk6-205ENSMUST00000224653 2976 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.67□□□□□ -0.54
Nkx2-1P50220 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-1P50220 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.66□□□□□ -0.54
Nkx2-1P50220 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.66□□□□□ -0.54
Nkx2-1P50220 Gm10060-201ENSMUST00000212002 111 ntBASIC11.66□□□□□ -0.54
Nkx2-1P50220 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.66□□□□□ -0.54
Nkx2-1P50220 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.66□□□□□ -0.54
Nkx2-1P50220 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.66□□□□□ -0.54
Nkx2-1P50220 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx2-1P50220 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms