Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rfx3P48381 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Gm6973-201ENSMUST00000117080 721 ntBASIC12.73□□□□□ -0.37
Rfx3P48381 Gm14494-201ENSMUST00000118786 435 ntBASIC12.73□□□□□ -0.37
Rfx3P48381 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.73□□□□□ -0.37
Rfx3P48381 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx3P48381 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.73□□□□□ -0.37
Rfx3P48381 Gm27920-201ENSMUST00000183953 96 ntBASIC12.73□□□□□ -0.37
Rfx3P48381 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.73□□□□□ -0.37
Rfx3P48381 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.73□□□□□ -0.37
Rfx3P48381 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rfx3P48381 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rfx3P48381 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.72□□□□□ -0.37
Rfx3P48381 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rfx3P48381 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.72□□□□□ -0.37
Rfx3P48381 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.72□□□□□ -0.37
Rfx3P48381 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.72□□□□□ -0.37
Rfx3P48381 Gm11025-201ENSMUST00000140773 466 ntBASIC12.72□□□□□ -0.37
Rfx3P48381 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.72□□□□□ -0.37
Rfx3P48381 Gm37230-201ENSMUST00000194491 818 ntBASIC12.72□□□□□ -0.37
Rfx3P48381 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.72□□□□□ -0.37
Rfx3P48381 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.72□□□□□ -0.37
Rfx3P48381 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rfx3P48381 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rfx3P48381 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rfx3P48381 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Rfx3P48381 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.71□□□□□ -0.37
Rfx3P48381 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.71□□□□□ -0.37
Rfx3P48381 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.71□□□□□ -0.37
Rfx3P48381 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Rfx3P48381 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.71□□□□□ -0.37
Rfx3P48381 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfx3P48381 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rfx3P48381 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfx3P48381 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms