Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Msh2P43247 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.52□□□□□ -0.08
Msh2P43247 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Gm13464-201ENSMUST00000119418 935 ntBASIC14.52□□□□□ -0.09
Msh2P43247 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.52□□□□□ -0.09
Msh2P43247 Gm11745-201ENSMUST00000121669 448 ntBASIC14.52□□□□□ -0.09
Msh2P43247 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.52□□□□□ -0.09
Msh2P43247 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Msh2P43247 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Msh2P43247 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Msh2P43247 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msh2P43247 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Msh2P43247 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Msh2P43247 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msh2P43247 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Gm15483-201ENSMUST00000120338 456 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.51□□□□□ -0.09
Msh2P43247 Gm8584-201ENSMUST00000171982 758 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Gm43575-201ENSMUST00000196420 516 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.51□□□□□ -0.09
Msh2P43247 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.51□□□□□ -0.09
Msh2P43247 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Msh2P43247 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh2P43247 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Msh2P43247 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Msh2P43247 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Gm6973-201ENSMUST00000117080 721 ntBASIC14.5□□□□□ -0.09
Msh2P43247 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
Msh2P43247 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.5□□□□□ -0.09
Msh2P43247 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Msh2P43247 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh2P43247 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.5□□□□□ -0.09
Msh2P43247 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms