Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.91□□□□□ -0.34
Nkx2-2P42586 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Gm27321-201ENSMUST00000185021 205 ntBASIC12.91□□□□□ -0.34
Nkx2-2P42586 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
Nkx2-2P42586 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm13223-201ENSMUST00000118609 747 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm13453-201ENSMUST00000118708 357 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm2445-201ENSMUST00000182798 989 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm17837-201ENSMUST00000186435 985 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx2-2P42586 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx2-2P42586 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.89□□□□□ -0.35
Nkx2-2P42586 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm3436-201ENSMUST00000179930 840 ntBASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.89□□□□□ -0.35
Nkx2-2P42586 Gm29741-201ENSMUST00000192667 421 ntBASIC12.89□□□□□ -0.35
Nkx2-2P42586 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.89□□□□□ -0.35
Nkx2-2P42586 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms