Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.02□□□□□ -0.16
LdlrP35951 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LdlrP35951 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LdlrP35951 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LdlrP35951 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.02□□□□□ -0.17
LdlrP35951 Rprl2-201ENSMUST00000157150 290 ntBASIC14.02□□□□□ -0.17
LdlrP35951 Gm18889-201ENSMUST00000174284 929 ntBASIC14.02□□□□□ -0.17
LdlrP35951 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LdlrP35951 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.02□□□□□ -0.17
LdlrP35951 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.02□□□□□ -0.17
LdlrP35951 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LdlrP35951 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.02□□□□□ -0.17
LdlrP35951 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LdlrP35951 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LdlrP35951 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Acot6-202ENSMUST00000222921 3622 ntBASIC14.01□□□□□ -0.17
LdlrP35951 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.01□□□□□ -0.17
LdlrP35951 Gm20553-201ENSMUST00000204205 844 ntBASIC14.01□□□□□ -0.17
LdlrP35951 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.01□□□□□ -0.17
LdlrP35951 Thap2-203ENSMUST00000218989 527 ntBASIC14.01□□□□□ -0.17
LdlrP35951 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LdlrP35951 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LdlrP35951 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LdlrP35951 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LdlrP35951 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LdlrP35951 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LdlrP35951 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14□□□□□ -0.17
LdlrP35951 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LdlrP35951 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14□□□□□ -0.17
LdlrP35951 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14□□□□□ -0.17
LdlrP35951 Gm5479-201ENSMUST00000160578 435 ntBASIC14□□□□□ -0.17
LdlrP35951 Gm10275-202ENSMUST00000168697 495 ntBASIC14□□□□□ -0.17
LdlrP35951 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14□□□□□ -0.17
LdlrP35951 Gm10275-201ENSMUST00000092620 635 ntBASIC14□□□□□ -0.17
LdlrP35951 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LdlrP35951 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms