Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc1P35601 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Rfc1P35601 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc1P35601 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.85□□□□□ -0.03
Rfc1P35601 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfc1P35601 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc1P35601 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.84□□□□□ -0.03
Rfc1P35601 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Rfc1P35601 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rfc1P35601 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.84□□□□□ -0.03
Rfc1P35601 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.84□□□□□ -0.03
Rfc1P35601 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc1P35601 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfc1P35601 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.84□□□□□ -0.03
Rfc1P35601 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc1P35601 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc1P35601 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rfc1P35601 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rfc1P35601 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc1P35601 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc1P35601 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Rfc1P35601 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Gm15173-201ENSMUST00000122049 433 ntBASIC14.83□□□□□ -0.04
Rfc1P35601 Gm11452-201ENSMUST00000122376 690 ntBASIC14.83□□□□□ -0.04
Rfc1P35601 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfc1P35601 Gm9682-201ENSMUST00000197505 556 ntBASIC14.83□□□□□ -0.04
Rfc1P35601 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rfc1P35601 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfc1P35601 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rfc1P35601 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfc1P35601 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Rfc1P35601 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc1P35601 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.82□□□□□ -0.04
Rfc1P35601 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.82□□□□□ -0.04
Rfc1P35601 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.82□□□□□ -0.04
Rfc1P35601 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfc1P35601 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rfc1P35601 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Mir8098-201ENSMUST00000184011 137 ntBASIC14.82□□□□□ -0.04
Rfc1P35601 Gm6550-201ENSMUST00000187574 993 ntBASIC14.82□□□□□ -0.04
Rfc1P35601 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfc1P35601 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rfc1P35601 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms